Abstract
Early-stage diabetic retinopathy (DR) presents challenges in clinical diagnosis due to inconspicuous and minute microaneurysms (MAs), resulting in limited research in this area. Additionally, the potential of emerging foundation models, such as the segment anything model (SAM), in medical scenarios remains rarely explored. In this work, we propose a human-in-the-loop, label-free early DR diagnosis framework called GlanceSeg, based on SAM. GlanceSeg enables real-time segmentation of MA lesions as ophthalmologists review fundus images. Our human-in-the-loop framework integrates the ophthalmologist's gaze maps, allowing for rough localization of minute lesions in fundus images. Subsequently, a saliency map is generated based on the located region of interest, which provides prompt points to assist the foundation model in efficiently segmenting MAs. Finally, a domain knowledge filtering (DKF) module refines the segmentation of minute lesions. We conducted experiments on two newly-built public datasets, i.e., IDRiD and Retinal-Lesions, and validated the feasibility and superiority of GlanceSeg through visualized illustrations and quantitative measures. Additionally, we demonstrated that GlanceSeg improves annotation efficiency for clinicians and further enhances segmentation performance through fine-tuning using annotations. The clinician-friendly GlanceSeg is able to segment small lesions in real-time, showing potential for clinical applications.
Original language | English |
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Pages (from-to) | 1-14 |
Number of pages | 14 |
Journal | IEEE Journal of Biomedical and Health Informatics |
DOIs | |
Publication status | Accepted/In press - 2024 |
Externally published | Yes |
Keywords
- Annotations
- Image segmentation
- Lesions
- Medical diagnostic imaging
- Real-time systems
- Solid modeling
- Task analysis
- computer-aided diagnosis
- eye-tracking
- segment anything model
- small lesions
- zero-shot
ASJC Scopus subject areas
- Computer Science Applications
- Health Informatics
- Electrical and Electronic Engineering
- Health Information Management